LIMEpi

Latent Interaction Modelling for Epistasis Detection

Current version

1.0 Dec 2013

Description

This is an R package that implements a two-stage epistasis detection procedure from genotype data, given a continuous phenotype. The first stage consists of SNP ranking and selection based on the SNP's potential to interact with a latent SNP-like variable.

Download

DownloadLIMEpi_1.0.tar.gz (GZ, 14 KB)

Authors and Contributors

Citation

Latent epistatic interaction model identifies loci associated with human working memory
Janos Z Kelemen, Christian Vogler, Angela Beck, Dominique de Quervain, Andreas Papassotiropoulos and Niko Beerenwinkel
external pagebioRxiv (2015)